论文专著:
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在BMC Bioinformatics, BMC Genomics,等SCI源刊物发表研究论文20篇,参与编写专著2部。
出版专著:
1、《生物信息学》,科学出版社,2007年,主编。
发表部分英文论文:
1. Hongxia Pang,…S.H.Tao, Statistical Distributions of Optimal Global Alignment Scores of Random Protein Sequences. BMC Bioinformatics 6:257 (15 October 2005)(SCI, IF =5.423)(通讯作者)
2. Jingfeng Chen,…, S.H. Tao. significant positive correlation between the recombination rate and GC content in the human pseudoautosomal region Genome 2006 Volume 49, Number 5, May 2006: 413-419(SCI, IF=2.1)(通讯作者)
3. Jingjing Li, …, S.H. Tao. A New Method for RAPD Primers Selection Based on Primer Bias in Nucleotide Sequence Data. J. of biotechnology 126(2006):415 -423 (SCI, IF=2.687)(通讯作者)
4. Li GL, Tao SH, Wang XJ. Sequence and epitope analysis of surface proteins of avian influenza H5N1 viruses from Asian patients. Chinese Science Bulletin 2006, 51 (20): 2472-2481(SCI, IF =0.783)
5. Li Mingkun,…, Shiheng Tao. Evolution of the Isochore Structure in the Scale of Chromosome: Insight from the Mutation Bias and Fixation Bias. J. of Evolutionary Biology. 2008 Jan;21(1):173-182. Epub 2007 Nov 12. (SCI, IF=3.92)(通讯作者)
6. Gong XD,…, Tao SH. Comparative Analysis of Essential Genes and Nonessential Genes in Escherichia coli K12. Mol Genet Genomics. 2007 Oct 18; Mol Genet Genomics (2008) 279: 87-94 :(SCI, IF=2.978)(通讯作者)
7. Yanhui Fan, … Shiheng Tao Patterns of Insertion and Deletion in Mammalian Genomes Current Genomics, 2007, 8, 370-378 (SCI, IF=0.782)(通讯作者)
8. Yanhui Fan, … Shiheng Tao The rates and patterns of insertions, deletions and substitutions in mouse and rat inferred from introns Chinese Science Bulletin 2008, 53 (18) (SCI, IF =0.77)(通讯作者)
9. Xia Shen, …Shiheng Tao, the correlations of the function and positional distribution of the cis- elements CArG around the TSS in the genes of the Mus musculus Genome, 2009 52:217-221(SCI, IF =1.76)(通讯作者)
10. Qi Shi, …Shiheng Tao, Chimpanzee and Human Intron Comparison Reveals Functional Constraints and Complex Evolution Genetica 2009 (SCI, IF =1.7)(in press) (通讯作者)
11. Wu WW, Huang XT, Cheng J, Li ZG, de Folter S, Huang ZR, Jiang XQ, Pang HX and Tao SH*. 2011. Conservation and evolution in and among SRF-and MEF2-type MADS domains and their binding sites. Molecular Biology and Evolution, 28: 501-511. (SCI, IF="9.872)
12. Jiang XQ, Xu Z, Li J, Shi YY, Wu WW and Tao SH*. 2011. The influence of deleterious mutations on adaptation in a sexual population. PLoS one, 6:e27757. (SCI, IF="4.411)"
13. Li L, Guo Y, Wu WW, Shi YY, Cheng J and Tao SH*. 2012. A comparison and evaluation of five biclustering algorithms by quantifying goodness of biclusters for gene expression data. BioData Mining, 5(1): 1-10. (SCI, IF="2.624))
14. Cheng J, Wu WW, Zhang YW, Li XC, Jiang XQ, Wei GH and Tao SH*. 2013. A new computational strategy for predicting essential genes. BMC Genomics, 14:910. (SCI, IF="4.397)
15. Jiang XQ, Hu SJ, Xu Q, Chang YJ and Tao SH*. 2013. Relative effects of segregation and recombination on the evolution of sex in finite diploid populations. Heredity, 111(6):505-512. (SCI, IF="4.110)"
16. Mao YH, Wang WT, Cheng N, Li Q and Tao SH*. 2013. Universally increased mRNA stability downstream of the translation initiation site in eukaryotes and prokaryotes. Gene, 517:230-235. (SCI, IF="2.196)
17. Mao YH, Li Q, Wang WT, Liang PQ and Tao SH*. 2013. Number variation of high stability regions is correlated with gene functions. Genome Biology Evolution, 5:484-493. (SCI, IF="4.759)
18.Mao YH, Liu HL, Liu YL and Tao SH*. 2014. Deciphering the rules by which dynamics of mRNA secondary structure affect translation efficiency in Saccharomyces cerevisiae. Nucleic Acids Research, 42:4813-4822. (SCI, IF="8.808
19.Chang YJ, Hua Y, Jiang XQ and Tao SH*. 2015. Influences of dominance and evolution of sex in finite diploid populations. PloS one, 10(5): e0128459. (SCI, IF="3.534)
20. Meng XW, Wang C, Rahman SR, Wang YX, Wang AL and Tao SH*. 2015. Genome-wide identification and evolution of HECT genes in soybean. International Journal of Molecular Sciences, 16(4):8517-8535. (SCI, IF="2.862)
发表中文期刊论文:
[1]韩岗,马婧,
陶士珩,张羽,杨健.厚壁菌门细菌及其祖先蛋白的氨基酸偏好性研究[J].安徽农业科学,2011,39(30):18408-18410.
[2]马婧,孙超,陶士珩,韩岗,杨健.基因组偏好影响细菌直系同源蛋白质组成[J].安徽农业科学,2011,39(26):15848-15854.
[3]王旺田,张金文,王蒂,张俊莲,司怀军,陶士珩.马铃薯块茎糖基转移酶基因的克隆及其RNAi载体的构建[J].作物学报,2011,37(11):1926-1934.
[4]范巍,陈金锋,陶士珩.基因分型错误对病例对照方法估计疾病外显率可靠性的影响[J].中国卫生统计,2010,27(06):567-571+576.
[5]王旺田,张金文,王蒂,陶士珩,季彦林,吴兵.光质与马铃薯块茎细胞信号分子和糖苷生物碱积累的关系[J].作物学报,2010,36(04):629-635.
[6]杜江峰,武永军,方晓峰,曹君霞,赵亮,陶士珩.生物信息方法预测高粱miRNA及其靶基因[J].科学通报,2010,55(07):553-561.
[7]刘桂玲,陶士珩,朱珊娜,李晨.葡萄病害诊断BP网络模型关键问题研究[J].农机化研究,2010,32(02):13-16.
[8]张银霞,曹钻,袁志发,陶士珩.相邻位点碱基突变的熵性质[J].浙江大学学报(农业与生命科学版),2010,36(01):43-48.
[9]杜江峰,武永军,张银霞,吴磊,陶士珩.信息熵方法大批量分析成熟体及前体miRNA序列的重要位点[J].中国科学(C辑:生命科学),2009,39(04):420-428.
[10]徐琪,吴信生,张学余,包文斌,陈国宏,侯庆文,陶士珩.狼山鸡核型参数与生产性能的关系研究[J].中国家禽,2008,30(24):33-35.
[11]范彦辉,陶士珩.用Perl实现在Windows下本地化运行BLAST[J].生物信息学,2008(04):178-179.
[12]范彦辉,师奇,陈金锋,王文娟,庞红侠,唐教伟,陶士珩.大鼠与小鼠内含子中插入、缺失与替换的速度与模式[J].科学通报,2008(16):1916-1922.
[13]张子龙,陶士珩,李加纳.甘蓝型黄籽油菜与黑籽油菜苗期生理特性的比较研究[J].作物学报,2007(05):837-842.
[14]裴国亮,李京敬,王长发,陶士珩.冷暖型小麦基因差异的最佳RAPD反应体系研究[J].安徽农业科学,2006(13):2993-2995.
[15]李军,王立祥,邵明安,陶士珩.宁南旱地作物降水生产潜力及其适度开发研究[J].水土保持学报,2001(S2):125-128.
[16]陶士珩,储建华,刘晓明,张荣梅,张镇,罗泽伟.应用混合群体的连锁不平衡信息实现基因定位的解析率分析[J].科学通报,2001(16):1356-1358.
[17]陶士珩,刘晓明,储建华,张荣梅,杜丽萍,罗泽伟.混合群体连锁不平衡的衰减速率与基因定位[J].科学通报,2000(21):2274-2280.
[18]张荣梅,杜丽萍,彭志海,储建华,刘晓明,陶士珩,罗泽伟.多结节性甲状腺肿的分子遗传学研究进展[J].中华医学遗传学杂志,2000(05):58-60.
[19]陶士珩,张荣梅,储建华,刘晓明,杜丽萍,齐庆远,罗泽伟.混合群体连锁不平衡的群体遗传学模型[J].科学通报,2000(19):2041-2047.
[20]钱允祺,陶士珩,王立祥,廖允诚.土壤湿度的统计特征及应用分析[J].中国农业气象,1999(01):3-5.
[21]钱允祺,陶士珩.黄土高原降雨雨滴最终速度的分布律[J].西北农业大学学报,1998(05):3-5.
[22]陶士珩,王立祥,胡希远,杜世平.土壤含水率测定的误差分析及控制[J].干旱地区农业研究,1997(02):87-91.
[23]胡希远,陶士珩,王立祥.半干旱偏旱区糜子沟垄径流栽培研究初报[J].干旱地区农业研究,1997(01):47-52.
[24]陶士珩,王立祥,胡希远.西北黄土高原水平梯田冬小麦的水分供应状况分析[J].中国农业气象,1996(03):7-9+13.
[25]蒋骏,许秀娟,陶士珩.宁南半干旱—半干旱偏旱区农业气候特征分析[J].干旱地区农业研究,1996(02):88-94.
[26]陶士珩,胡希远,王俊鹏,杜世平.宁南山区水平梯田的水分供应订正函数[J].干旱地区农业研究,1995(04):33-39.
发表会议论文:
[1]杜江峰,方晓峰,陶士珩,武永军. 生物信息法预测高粱miRNA及其靶基因[C]. 中国植物生理学会环境生理与营养生理专业委员会.第六届中国植物逆境生理学与分子生物学学术研讨会论文摘要汇编.中国植物生理学会环境生理与营养生理专业委员会:中国植物生理学会,2010:50.